Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CDCA3Q99618 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDCA3Q99618 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.62■□□□□ 0.41
CDCA3Q99618 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA3Q99618 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
CDCA3Q99618 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.61■□□□□ 0.41
CDCA3Q99618 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDCA3Q99618 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CDCA3Q99618 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.61■□□□□ 0.41
CDCA3Q99618 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 ARSEP1-201ENST00000420443 635 ntBASIC17.61■□□□□ 0.41
CDCA3Q99618 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDCA3Q99618 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA3Q99618 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC17.61■□□□□ 0.41
CDCA3Q99618 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.61■□□□□ 0.41
CDCA3Q99618 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.61■□□□□ 0.41
CDCA3Q99618 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 AL021920.2-201ENST00000624828 1351 ntBASIC17.61■□□□□ 0.41
CDCA3Q99618 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.61■□□□□ 0.41
CDCA3Q99618 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDCA3Q99618 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CDCA3Q99618 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CDCA3Q99618 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDCA3Q99618 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA3Q99618 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDCA3Q99618 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CDCA3Q99618 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
CDCA3Q99618 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.6■□□□□ 0.41
CDCA3Q99618 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.6■□□□□ 0.41
CDCA3Q99618 CYP2A7P1-201ENST00000595391 815 ntBASIC17.6■□□□□ 0.41
CDCA3Q99618 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC17.6■□□□□ 0.41
CDCA3Q99618 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CDCA3Q99618 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDCA3Q99618 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CDCA3Q99618 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.6■□□□□ 0.41
CDCA3Q99618 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 CETN4P-206ENST00000642099 2168 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA3Q99618 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 AC133963.1-201ENST00000504166 1679 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 LINC00895-201ENST00000629028 1637 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA3Q99618 KRT8P49-201ENST00000604166 1432 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
CDCA3Q99618 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.59■□□□□ 0.41
CDCA3Q99618 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC17.59■□□□□ 0.41
CDCA3Q99618 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CDCA3Q99618 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.59■□□□□ 0.41
CDCA3Q99618 AC140912.1-201ENST00000577171 1054 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 TEX28P1-201ENST00000613479 1221 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 TEX28P2-201ENST00000617764 1221 ntBASIC17.59■□□□□ 0.41
CDCA3Q99618 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDCA3Q99618 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CDCA3Q99618 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA3Q99618 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.59■□□□□ 0.41
CDCA3Q99618 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms