Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AC012640.2-201ENST00000561606 901 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AC005593.1-201ENST00000624894 515 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 AC012313.1-201ENST00000593393 3059 ntBASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SH3KBP1Q96B97 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 AL356488.2-201ENST00000602755 427 ntBASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SH3KBP1Q96B97 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AL591424.1-201ENST00000442569 1213 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AC136632.2-201ENST00000512891 861 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 RNA5SP415-201ENST00000517246 115 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 TERC-201ENST00000602385 541 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 Z83851.2-201ENST00000609564 659 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AC011270.2-201ENST00000624293 2550 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AC004817.3-201ENST00000602957 2129 ntBASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SH3KBP1Q96B97 AL139384.1-201ENST00000612143 3047 ntBASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AC104109.2-201ENST00000602919 1418 ntBASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SH3KBP1Q96B97 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms