Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 AC093525.9-201ENST00000624961 1746 ntBASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
RAB40AQ8WXH6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
RAB40AQ8WXH6 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.08■□□□□ 0.01
RAB40AQ8WXH6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40AQ8WXH6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40AQ8WXH6 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
RAB40AQ8WXH6 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AC078925.2-201ENST00000624013 1973 ntBASIC15.08■□□□□ 0
RAB40AQ8WXH6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AP002414.4-201ENST00000589764 1148 ntBASIC15.08■□□□□ 0
RAB40AQ8WXH6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 IGHV3-41-201ENST00000613121 348 ntBASIC15.08■□□□□ 0
RAB40AQ8WXH6 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.08■□□□□ 0
RAB40AQ8WXH6 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 LINC02199-201ENST00000506655 2702 ntBASIC15.08■□□□□ 0
RAB40AQ8WXH6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RAB40AQ8WXH6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 AP002383.4-201ENST00000442518 975 ntBASIC15.07■□□□□ 0
RAB40AQ8WXH6 TOLLIP-AS1-201ENST00000530897 939 ntBASIC15.07■□□□□ 0
RAB40AQ8WXH6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 MIR3652-201ENST00000579335 131 ntBASIC15.07■□□□□ 0
RAB40AQ8WXH6 TK1-205ENST00000590862 642 ntTSL 3 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RAB40AQ8WXH6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC15.07■□□□□ 0
RAB40AQ8WXH6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40AQ8WXH6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40AQ8WXH6 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40AQ8WXH6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
RAB40AQ8WXH6 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
RAB40AQ8WXH6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
RAB40AQ8WXH6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.06■□□□□ 0
RAB40AQ8WXH6 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms