Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 AP3S2-216ENST00000617003 1561 ntBASIC20.58■□□□□ 0.89
SNED1Q8TER0 AC012317.2-201ENST00000623305 2251 ntBASIC20.58■□□□□ 0.89
SNED1Q8TER0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 CU639417.3-201ENST00000624240 1404 ntBASIC20.58■□□□□ 0.89
SNED1Q8TER0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.89
SNED1Q8TER0 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNED1Q8TER0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNED1Q8TER0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNED1Q8TER0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SNED1Q8TER0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNED1Q8TER0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 AC010336.2-201ENST00000564226 506 ntBASIC20.58■□□□□ 0.88
SNED1Q8TER0 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 AL359881.2-201ENST00000602973 570 ntBASIC20.58■□□□□ 0.88
SNED1Q8TER0 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNED1Q8TER0 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 EGFEM1P-202ENST00000431685 1563 ntBASIC20.58■□□□□ 0.88
SNED1Q8TER0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
SNED1Q8TER0 NOC2LP1-202ENST00000452600 2235 ntBASIC20.58■□□□□ 0.88
SNED1Q8TER0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNED1Q8TER0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNED1Q8TER0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 AC004840.1-201ENST00000636359 365 ntBASIC20.57■□□□□ 0.88
SNED1Q8TER0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 AC008764.6-201ENST00000595909 2069 ntBASIC20.57■□□□□ 0.88
SNED1Q8TER0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNED1Q8TER0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNED1Q8TER0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNED1Q8TER0 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNED1Q8TER0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 API5-211ENST00000534695 560 ntTSL 5 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SNED1Q8TER0 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNED1Q8TER0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 TEX28P1-201ENST00000613479 1221 ntBASIC20.55■□□□□ 0.88
SNED1Q8TER0 TEX28P2-201ENST00000617764 1221 ntBASIC20.55■□□□□ 0.88
SNED1Q8TER0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNED1Q8TER0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.55■□□□□ 0.88
SNED1Q8TER0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNED1Q8TER0 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
SNED1Q8TER0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms