Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rc3h1Q4VGL6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Gm15240-201ENSMUST00000118156 720 ntBASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Gm11434-201ENSMUST00000122379 629 ntBASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Mir6392-201ENSMUST00000184924 108 ntBASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 AC238811.3-201ENSMUST00000225422 709 ntBASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rc3h1Q4VGL6 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm5279-201ENSMUST00000199575 745 ntBASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Gm45059-201ENSMUST00000205558 1077 ntBASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rc3h1Q4VGL6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Gm8515-201ENSMUST00000194852 576 ntBASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Mir497b-201ENSMUST00000093601 125 ntBASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.28■□□□□ 0.2
Rc3h1Q4VGL6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms