Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 MIR1233-2-201ENST00000408138 82 ntBASIC17.5■□□□□ 0.39
SLC6A4P31645 MIR1233-1-201ENST00000408722 82 ntBASIC17.5■□□□□ 0.39
SLC6A4P31645 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC6A4P31645 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 ALG1L5P-201ENST00000482043 771 ntBASIC17.5■□□□□ 0.39
SLC6A4P31645 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC6A4P31645 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC6A4P31645 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 MTDHP5-201ENST00000598980 586 ntBASIC17.5■□□□□ 0.39
SLC6A4P31645 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 AC106820.2-201ENST00000563775 3264 ntBASIC17.5■□□□□ 0.39
SLC6A4P31645 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC6A4P31645 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC6A4P31645 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC6A4P31645 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A4P31645 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC6A4P31645 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A4P31645 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 DNAJB3-201ENST00000446806 729 ntBASIC17.49■□□□□ 0.39
SLC6A4P31645 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A4P31645 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC6A4P31645 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.49■□□□□ 0.39
SLC6A4P31645 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A4P31645 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 GPALPP1-207ENST00000611650 899 ntBASIC17.49■□□□□ 0.39
SLC6A4P31645 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC6A4P31645 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC6A4P31645 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC6A4P31645 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
SLC6A4P31645 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A4P31645 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A4P31645 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 AC092919.2-201ENST00000623631 1645 ntBASIC17.48■□□□□ 0.39
SLC6A4P31645 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A4P31645 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC6A4P31645 AC074386.1-202ENST00000463561 864 ntBASIC17.48■□□□□ 0.39
SLC6A4P31645 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC6A4P31645 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC6A4P31645 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC6A4P31645 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
SLC6A4P31645 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC6A4P31645 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A4P31645 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms