Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 OVCH1-AS1-204ENST00000641955 5529 ntBASIC17.48■□□□□ 0.39
MT-ND3P03897 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.48■□□□□ 0.39
MT-ND3P03897 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 AC004870.1-201ENST00000315132 882 ntBASIC17.48■□□□□ 0.39
MT-ND3P03897 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-ND3P03897 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.48■□□□□ 0.39
MT-ND3P03897 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.48■□□□□ 0.39
MT-ND3P03897 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MT-ND3P03897 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MT-ND3P03897 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.47■□□□□ 0.39
MT-ND3P03897 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.47■□□□□ 0.39
MT-ND3P03897 Z83836.1-201ENST00000624605 1642 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
MT-ND3P03897 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 AC096633.1-201ENST00000422446 749 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MT-ND3P03897 MTCL1P1-201ENST00000446207 792 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.47■□□□□ 0.39
MT-ND3P03897 RNF126P1-202ENST00000569893 925 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 AC005332.3-201ENST00000589904 676 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 LINC01711-201ENST00000598340 967 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.47■□□□□ 0.39
MT-ND3P03897 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
MT-ND3P03897 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.47■□□□□ 0.39
MT-ND3P03897 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.47■□□□□ 0.39
MT-ND3P03897 RNF216P1-203ENST00000404404 2427 ntBASIC17.47■□□□□ 0.39
MT-ND3P03897 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MT-ND3P03897 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
MT-ND3P03897 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 AC079328.2-201ENST00000561241 3354 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND3P03897 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND3P03897 FAAHP1-202ENST00000446499 1238 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.46■□□□□ 0.39
MT-ND3P03897 AC012615.1-201ENST00000565797 1299 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 GPR32P1-201ENST00000601788 811 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 AL121772.3-201ENST00000610840 674 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 IGHV3-41-201ENST00000613121 348 ntBASIC17.46■□□□□ 0.39
MT-ND3P03897 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND3P03897 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.46■□□□□ 0.39
MT-ND3P03897 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.46■□□□□ 0.39
MT-ND3P03897 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
MT-ND3P03897 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND3P03897 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND3P03897 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND3P03897 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.46■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms