Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN1O15353 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
FOXN1O15353 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
FOXN1O15353 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXN1O15353 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXN1O15353 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
FOXN1O15353 FAM58DP-201ENST00000428076 619 ntBASIC20.39■□□□□ 0.85
FOXN1O15353 HLA-DPB2-205ENST00000435074 1188 ntBASIC20.39■□□□□ 0.85
FOXN1O15353 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXN1O15353 KRT18P65-201ENST00000439811 1286 ntBASIC20.39■□□□□ 0.85
FOXN1O15353 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXN1O15353 KRT8P48-201ENST00000515599 1220 ntBASIC20.39■□□□□ 0.85
FOXN1O15353 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.39■□□□□ 0.85
FOXN1O15353 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC20.39■□□□□ 0.85
FOXN1O15353 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC20.39■□□□□ 0.85
FOXN1O15353 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.39■□□□□ 0.85
FOXN1O15353 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC20.39■□□□□ 0.85
FOXN1O15353 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.39■□□□□ 0.85
FOXN1O15353 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
FOXN1O15353 AL805961.1-202ENST00000641562 540 ntBASIC20.39■□□□□ 0.85
FOXN1O15353 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN1O15353 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
FOXN1O15353 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN1O15353 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
FOXN1O15353 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
FOXN1O15353 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 NME9-203ENST00000383180 2133 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXN1O15353 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXN1O15353 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXN1O15353 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC20.38■□□□□ 0.85
FOXN1O15353 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXN1O15353 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXN1O15353 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXN1O15353 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
FOXN1O15353 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.38■□□□□ 0.85
FOXN1O15353 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.38■□□□□ 0.85
FOXN1O15353 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
FOXN1O15353 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
FOXN1O15353 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
FOXN1O15353 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
FOXN1O15353 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 KRT18P32-201ENST00000424695 1287 ntBASIC20.37■□□□□ 0.85
FOXN1O15353 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC20.37■□□□□ 0.85
FOXN1O15353 AC112191.1-201ENST00000523689 701 ntBASIC20.37■□□□□ 0.85
FOXN1O15353 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.37■□□□□ 0.85
FOXN1O15353 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.37■□□□□ 0.85
FOXN1O15353 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 AC100803.2-201ENST00000562459 1963 ntBASIC20.37■□□□□ 0.85
FOXN1O15353 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
FOXN1O15353 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
FOXN1O15353 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
FOXN1O15353 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC20.36■□□□□ 0.85
FOXN1O15353 AL158211.3-201ENST00000607385 239 ntBASIC20.36■□□□□ 0.85
FOXN1O15353 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
FOXN1O15353 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.36■□□□□ 0.85
FOXN1O15353 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
FOXN1O15353 AL133338.1-201ENST00000565695 1517 ntBASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms