Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX1O00570 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 USP32P1-208ENST00000506594 1164 ntBASIC18.01■□□□□ 0.47
SOX1O00570 RNA5SP412-201ENST00000516234 123 ntBASIC18.01■□□□□ 0.47
SOX1O00570 AC105233.2-201ENST00000523697 349 ntBASIC18.01■□□□□ 0.47
SOX1O00570 AF228730.5-201ENST00000530288 346 ntBASIC18.01■□□□□ 0.47
SOX1O00570 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX1O00570 BANF1P1-201ENST00000553684 263 ntBASIC18.01■□□□□ 0.47
SOX1O00570 C2orf69P2-201ENST00000562032 1123 ntBASIC18.01■□□□□ 0.47
SOX1O00570 AC015936.2-201ENST00000593177 259 ntBASIC18.01■□□□□ 0.47
SOX1O00570 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
SOX1O00570 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC18.01■□□□□ 0.47
SOX1O00570 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.01■□□□□ 0.47
SOX1O00570 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SOX1O00570 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC18.01■□□□□ 0.47
SOX1O00570 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18■□□□□ 0.47
SOX1O00570 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18■□□□□ 0.47
SOX1O00570 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
SOX1O00570 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 AL353705.2-201ENST00000428243 662 ntBASIC18■□□□□ 0.47
SOX1O00570 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18■□□□□ 0.47
SOX1O00570 KLF2P4-201ENST00000451959 1225 ntBASIC18■□□□□ 0.47
SOX1O00570 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18■□□□□ 0.47
SOX1O00570 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
SOX1O00570 AL512361.1-201ENST00000554200 418 ntBASIC18■□□□□ 0.47
SOX1O00570 AC023310.3-201ENST00000557027 670 ntBASIC18■□□□□ 0.47
SOX1O00570 AC100756.1-201ENST00000562736 682 ntBASIC18■□□□□ 0.47
SOX1O00570 AC138749.3-201ENST00000567691 622 ntBASIC18■□□□□ 0.47
SOX1O00570 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18■□□□□ 0.47
SOX1O00570 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18■□□□□ 0.47
SOX1O00570 AC116165.1-201ENST00000611806 668 ntBASIC18■□□□□ 0.47
SOX1O00570 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 AC018665.1-201ENST00000622927 1362 ntBASIC18■□□□□ 0.47
SOX1O00570 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18■□□□□ 0.47
SOX1O00570 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SOX1O00570 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18■□□□□ 0.47
SOX1O00570 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18■□□□□ 0.47
SOX1O00570 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX1O00570 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX1O00570 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SOX1O00570 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 FOXO1B-201ENST00000504678 1527 ntBASIC17.99■□□□□ 0.47
SOX1O00570 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
SOX1O00570 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SOX1O00570 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX1O00570 KRT43P-201ENST00000434019 910 ntBASIC17.99■□□□□ 0.47
SOX1O00570 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX1O00570 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SOX1O00570 CSF2RBP1-201ENST00000447905 391 ntBASIC17.99■□□□□ 0.47
SOX1O00570 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.99■□□□□ 0.47
SOX1O00570 TPRX2P-201ENST00000535362 881 ntBASIC17.99■□□□□ 0.47
SOX1O00570 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC17.99■□□□□ 0.47
SOX1O00570 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.99■□□□□ 0.47
SOX1O00570 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.99■□□□□ 0.47
SOX1O00570 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.99■□□□□ 0.47
SOX1O00570 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.99■□□□□ 0.47
SOX1O00570 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SOX1O00570 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SOX1O00570 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SOX1O00570 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
SOX1O00570 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.98■□□□□ 0.47
SOX1O00570 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SOX1O00570 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.98■□□□□ 0.47
SOX1O00570 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.98■□□□□ 0.47
SOX1O00570 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.98■□□□□ 0.47
SOX1O00570 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms