Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 POM121L3P-201ENST00000419331 1163 ntBASIC16.19■□□□□ 0.18
RNF6Q9Y252 TSPY12P-201ENST00000421279 868 ntBASIC16.19■□□□□ 0.18
RNF6Q9Y252 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 AC120114.3-201ENST00000611923 658 ntBASIC16.19■□□□□ 0.18
RNF6Q9Y252 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF6Q9Y252 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF6Q9Y252 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 GPALPP1-207ENST00000611650 899 ntBASIC16.18■□□□□ 0.18
RNF6Q9Y252 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
RNF6Q9Y252 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF6Q9Y252 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 AC064862.7-201ENST00000604520 867 ntBASIC16.17■□□□□ 0.18
RNF6Q9Y252 BX640515.1-201ENST00000617215 977 ntBASIC16.17■□□□□ 0.18
RNF6Q9Y252 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.17■□□□□ 0.18
RNF6Q9Y252 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RNF6Q9Y252 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.16■□□□□ 0.18
RNF6Q9Y252 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RNF6Q9Y252 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms