Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.71□□□□□ -0.53
LYSTQ99698 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LYSTQ99698 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC11.71□□□□□ -0.53
LYSTQ99698 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.71□□□□□ -0.53
LYSTQ99698 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.71□□□□□ -0.53
LYSTQ99698 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.71□□□□□ -0.53
LYSTQ99698 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
LYSTQ99698 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 WASH6P-202ENST00000359512 1437 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 LINC00304-203ENST00000565008 1864 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
LYSTQ99698 AC241585.1-201ENST00000433527 519 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 AC092552.1-201ENST00000547243 906 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.71□□□□□ -0.53
LYSTQ99698 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
LYSTQ99698 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
LYSTQ99698 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LYSTQ99698 KRT8P44-201ENST00000441609 1350 ntBASIC11.71□□□□□ -0.54
LYSTQ99698 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.71□□□□□ -0.54
LYSTQ99698 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
LYSTQ99698 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 HLA-DPB2-205ENST00000435074 1188 ntBASIC11.71□□□□□ -0.54
LYSTQ99698 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.71□□□□□ -0.54
LYSTQ99698 RN7SL752P-201ENST00000463779 287 ntBASIC11.71□□□□□ -0.54
LYSTQ99698 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.71□□□□□ -0.54
LYSTQ99698 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.71□□□□□ -0.54
LYSTQ99698 AC068587.10-201ENST00000641210 219 ntBASIC11.71□□□□□ -0.54
LYSTQ99698 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
LYSTQ99698 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC11.71□□□□□ -0.54
LYSTQ99698 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
LYSTQ99698 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.71□□□□□ -0.54
LYSTQ99698 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
LYSTQ99698 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC11.7□□□□□ -0.54
LYSTQ99698 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
LYSTQ99698 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.7□□□□□ -0.54
LYSTQ99698 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
LYSTQ99698 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.7□□□□□ -0.54
LYSTQ99698 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC11.7□□□□□ -0.54
LYSTQ99698 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
LYSTQ99698 AL353779.1-201ENST00000434793 351 ntBASIC11.7□□□□□ -0.54
LYSTQ99698 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC11.7□□□□□ -0.54
LYSTQ99698 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
LYSTQ99698 AC027369.6-201ENST00000525520 931 ntBASIC11.7□□□□□ -0.54
LYSTQ99698 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC11.7□□□□□ -0.54
LYSTQ99698 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms