Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FZD10-202ENST00000539839 3282 ntBASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TRAM1L1Q8N609 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 AL021920.2-201ENST00000624828 1351 ntBASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 AP001094.4-201ENST00000579008 2176 ntBASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TRAM1L1Q8N609 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MIR574-201ENST00000385209 96 ntBASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 KRT18P58-201ENST00000527480 1120 ntBASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 AC140113.2-201ENST00000604370 208 ntBASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 AC064836.3-201ENST00000607928 673 ntBASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 REXO1L3P-201ENST00000622202 1288 ntBASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRAM1L1Q8N609 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 MED15P5-201ENST00000423150 992 ntBASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 PMS2P1-201ENST00000431037 1228 ntBASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 AC026471.1-201ENST00000564629 3026 ntBASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRAM1L1Q8N609 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 IGLL3P-201ENST00000412472 434 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 AC007967.2-201ENST00000432613 625 ntBASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRAM1L1Q8N609 CXCL1P1-201ENST00000502804 216 ntBASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms