Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.8■□□□□ 0.76
HERVK_113P62684 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.8■□□□□ 0.76
HERVK_113P62684 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.8■□□□□ 0.76
HERVK_113P62684 AC009093.7-201ENST00000623853 1223 ntBASIC19.8■□□□□ 0.76
HERVK_113P62684 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.8■□□□□ 0.76
HERVK_113P62684 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.8■□□□□ 0.76
HERVK_113P62684 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
HERVK_113P62684 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.8■□□□□ 0.76
HERVK_113P62684 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HERVK_113P62684 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERVK_113P62684 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERVK_113P62684 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERVK_113P62684 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HERVK_113P62684 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 AL671277.1-201ENST00000429656 993 ntBASIC19.79■□□□□ 0.76
HERVK_113P62684 AC140658.5-201ENST00000438532 169 ntBASIC19.79■□□□□ 0.76
HERVK_113P62684 FAM86GP-201ENST00000448322 971 ntBASIC19.79■□□□□ 0.76
HERVK_113P62684 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.79■□□□□ 0.76
HERVK_113P62684 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.79■□□□□ 0.76
HERVK_113P62684 KRT8P48-201ENST00000515599 1220 ntBASIC19.79■□□□□ 0.76
HERVK_113P62684 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERVK_113P62684 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERVK_113P62684 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERVK_113P62684 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
HERVK_113P62684 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.79■□□□□ 0.76
HERVK_113P62684 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC19.79■□□□□ 0.76
HERVK_113P62684 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
HERVK_113P62684 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.79■□□□□ 0.76
HERVK_113P62684 AL645608.8-201ENST00000606034 2086 ntBASIC19.79■□□□□ 0.76
HERVK_113P62684 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HERVK_113P62684 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HERVK_113P62684 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
HERVK_113P62684 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC19.78■□□□□ 0.76
HERVK_113P62684 FAM86C2P-203ENST00000528684 1004 ntBASIC19.78■□□□□ 0.76
HERVK_113P62684 AC107918.2-201ENST00000530817 355 ntBASIC19.78■□□□□ 0.76
HERVK_113P62684 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HERVK_113P62684 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 AL645728.2-201ENST00000641974 660 ntBASIC19.78■□□□□ 0.76
HERVK_113P62684 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.78■□□□□ 0.76
HERVK_113P62684 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.78■□□□□ 0.76
HERVK_113P62684 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERVK_113P62684 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.78■□□□□ 0.76
HERVK_113P62684 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 AC012313.1-201ENST00000593393 3059 ntBASIC19.77■□□□□ 0.76
HERVK_113P62684 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
HERVK_113P62684 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.77■□□□□ 0.76
HERVK_113P62684 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.77■□□□□ 0.76
HERVK_113P62684 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.77■□□□□ 0.76
HERVK_113P62684 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.77■□□□□ 0.76
HERVK_113P62684 AC015911.4-201ENST00000588022 1070 ntBASIC19.77■□□□□ 0.76
HERVK_113P62684 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.77■□□□□ 0.76
HERVK_113P62684 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.77■□□□□ 0.76
HERVK_113P62684 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.77■□□□□ 0.76
HERVK_113P62684 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HERVK_113P62684 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms