Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CD4P01730 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CD4P01730 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.86■□□□□ 0.61
CD4P01730 AC107890.1-201ENST00000422478 521 ntBASIC18.86■□□□□ 0.61
CD4P01730 RBPMS2P1-201ENST00000437762 623 ntBASIC18.86■□□□□ 0.61
CD4P01730 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 AC005225.4-201ENST00000557330 545 ntBASIC18.86■□□□□ 0.61
CD4P01730 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.86■□□□□ 0.61
CD4P01730 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.86■□□□□ 0.61
CD4P01730 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.86■□□□□ 0.61
CD4P01730 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.86■□□□□ 0.61
CD4P01730 AC012645.4-201ENST00000610691 1061 ntBASIC18.86■□□□□ 0.61
CD4P01730 RAB34-224ENST00000636513 888 ntTSL 5 BASIC18.86■□□□□ 0.61
CD4P01730 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.86■□□□□ 0.61
CD4P01730 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CD4P01730 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.86■□□□□ 0.61
CD4P01730 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 NOC2LP1-202ENST00000452600 2235 ntBASIC18.85■□□□□ 0.61
CD4P01730 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.85■□□□□ 0.61
CD4P01730 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.85■□□□□ 0.61
CD4P01730 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC18.85■□□□□ 0.61
CD4P01730 AC140878.1-201ENST00000565277 250 ntBASIC18.85■□□□□ 0.61
CD4P01730 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.85■□□□□ 0.61
CD4P01730 AC084121.4-201ENST00000641598 221 ntBASIC18.85■□□□□ 0.61
CD4P01730 AF228730.8-201ENST00000642140 221 ntBASIC18.85■□□□□ 0.61
CD4P01730 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.85■□□□□ 0.61
CD4P01730 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 AC090340.1-201ENST00000620778 4980 ntBASIC18.85■□□□□ 0.61
CD4P01730 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CD4P01730 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CD4P01730 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CD4P01730 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 FO538757.1-201ENST00000623083 1397 ntBASIC18.84■□□□□ 0.61
CD4P01730 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CD4P01730 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 FAM207CP-201ENST00000443486 507 ntBASIC18.84■□□□□ 0.61
CD4P01730 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.84■□□□□ 0.61
CD4P01730 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.84■□□□□ 0.61
CD4P01730 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CD4P01730 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.84■□□□□ 0.61
CD4P01730 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
CD4P01730 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
CD4P01730 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CD4P01730 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.84■□□□□ 0.61
CD4P01730 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD4P01730 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CD4P01730 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD4P01730 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD4P01730 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CD4P01730 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CD4P01730 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms