Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 DFFBP1-201ENST00000433250 979 ntBASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 MIR4525-201ENST00000580000 75 ntBASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZC3H4Q9UPT8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 KRT17P8-201ENST00000540749 863 ntBASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 RAB43P1-201ENST00000561790 589 ntBASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZC3H4Q9UPT8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H4Q9UPT8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
ZC3H4Q9UPT8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H4Q9UPT8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.88
ZC3H4Q9UPT8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ZC3H4Q9UPT8 AC087499.5-201ENST00000452760 1342 ntBASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 RN7SL752P-201ENST00000463779 287 ntBASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 NKG7-205ENST00000600427 520 ntTSL 3 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 AL133338.1-201ENST00000565695 1517 ntBASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 AC046185.3-201ENST00000623228 1824 ntBASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 AC009113.1-201ENST00000570267 2443 ntBASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZC3H4Q9UPT8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 PGF-202ENST00000405431 666 ntTSL 5 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC087499.6-201ENST00000411576 835 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC112492.5-201ENST00000421897 457 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC022210.1-201ENST00000449856 793 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 RARRES2P9-201ENST00000565168 469 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC009407.1-201ENST00000568958 598 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC008738.7-201ENST00000609744 511 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 AC104581.1-202ENST00000635932 2618 ntBASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZC3H4Q9UPT8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.55■□□□□ 0.88
ZC3H4Q9UPT8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms