Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC097262.1-201ENST00000452559 548 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 ZNF114P1-201ENST00000453500 292 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 RNU5A-7P-201ENST00000515979 116 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 FGL1-206ENST00000518650 1093 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AP003072.1-201ENST00000531740 145 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC089984.2-201ENST00000550293 1201 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 MED31-202ENST00000574128 619 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC090912.1-201ENST00000578831 570 ntTSL 4 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC005616.1-201ENST00000592931 579 ntTSL 4 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 ZNF257-207ENST00000600162 817 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC119501.1-201ENST00000603646 475 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 SNX5-217ENST00000606557 1087 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL031775.2-201ENST00000606921 405 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 CT45A8-202ENST00000611660 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 CT45A2-202ENST00000612907 1008 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC009878.1-201ENST00000621819 340 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 LRRC77P-213ENST00000637727 880 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 ANXA10-201ENST00000359299 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 FAM99A-202ENST00000538190 1989 ntBASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 TPD52L3-203ENST00000381428 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC10.81□□□□□ -0.68
KRTAP3-3Q9BYR6 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DDX25-202ENST00000525943 1646 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC009403.1-202ENST00000460022 1356 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AL133245.1-201ENST00000608925 1365 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 REST-206ENST00000612429 1376 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 REST-207ENST00000616975 1370 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 FAM209A-201ENST00000371328 911 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 RMRPP5-201ENST00000411156 267 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC01276-201ENST00000416951 816 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TMPOP1-202ENST00000424642 1267 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 MTND1P28-201ENST00000435623 950 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 SUMO2P1-206ENST00000445436 284 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TAMM41-206ENST00000455809 1213 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 KCNMB3-207ENST00000497599 1004 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC091893.1-201ENST00000503772 399 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC079942.1-201ENST00000505557 384 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 PDPN-209ENST00000510906 786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02107-201ENST00000513039 462 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AL358333.3-201ENST00000553603 479 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LSM7-203ENST00000585409 512 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 NTF6A-201ENST00000591175 560 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LINC00969-233ENST00000597871 839 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DPRXP5-201ENST00000604662 539 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 NOP16-207ENST00000614830 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC090517.2-201ENST00000614966 680 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 AC074183.2-201ENST00000623112 922 ntBASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
KRTAP3-3Q9BYR6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms