Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
PCGF1Q9BSM1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 BX276092.7-203ENST00000637198 1536 ntBASIC14.46□□□□□ -0.1
PCGF1Q9BSM1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 RPS2P28-201ENST00000314255 741 ntBASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 AC120114.3-201ENST00000611923 658 ntBASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 AL139288.1-201ENST00000623748 933 ntBASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 LINC01451-201ENST00000623792 534 ntBASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
PCGF1Q9BSM1 PC-208ENST00000529047 1607 ntTSL 3 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AL118508.1-201ENST00000613502 2345 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AL022342.1-201ENST00000400363 863 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AL590627.1-203ENST00000421194 1026 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 BX005266.1-201ENST00000473402 457 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 MSRA-206ENST00000521209 814 ntTSL 3 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC021087.4-201ENST00000563761 564 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 NKAPP1-205ENST00000585790 367 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AP000867.4-201ENST00000641616 219 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 AC133963.1-201ENST00000504166 1679 ntBASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCGF1Q9BSM1 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms