Protein–RNA interactions for Protein: Q8IUZ0

LRRC49, Leucine-rich repeat-containing protein 49, humanhuman

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49Q8IUZ0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AP002469.2-201ENST00000531724 424 ntBASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 GGTLC5P-201ENST00000617623 998 ntBASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AL031008.1-201ENST00000619963 541 ntBASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AC106820.2-201ENST00000563775 3264 ntBASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 AL021920.2-201ENST00000624828 1351 ntBASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LRRC49Q8IUZ0 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 PRORSD1P-202ENST00000563365 2154 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC079781.3-201ENST00000449110 356 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC136632.2-201ENST00000512891 861 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AP002490.2-201ENST00000524791 560 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AL662844.1-201ENST00000546340 181 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC105339.3-201ENST00000560043 636 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AL773604.1-201ENST00000617417 272 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 AC243591.1-201ENST00000452967 1364 ntBASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LRRC49Q8IUZ0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 AC073621.1-201ENST00000392730 636 ntBASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 MIR1199-201ENST00000621445 119 ntBASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 AC006504.4-201ENST00000592118 1568 ntBASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRRC49Q8IUZ0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC49Q8IUZ0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
LRRC49Q8IUZ0 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
LRRC49Q8IUZ0 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms