Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
PPP4R4Q6NUP7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 AC022188.1-201ENST00000620960 1664 ntBASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 AC083849.1-201ENST00000615227 514 ntBASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PPP4R4Q6NUP7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 PCED1CP-201ENST00000419887 785 ntBASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AC092068.3-201ENST00000587894 2016 ntBASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 AL121956.5-201ENST00000625261 221 ntBASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PPP4R4Q6NUP7 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms