Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
GRIK1P39086 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
GRIK1P39086 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
GRIK1P39086 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.05■□□□□ 0.48
GRIK1P39086 AC005332.8-201ENST00000622750 2735 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
GRIK1P39086 MIR1233-2-201ENST00000408138 82 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 MIR1233-1-201ENST00000408722 82 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.05■□□□□ 0.48
GRIK1P39086 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.05■□□□□ 0.48
GRIK1P39086 AC004832.2-201ENST00000426397 482 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 CXCL1P1-201ENST00000502804 216 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.05■□□□□ 0.48
GRIK1P39086 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 AC010327.4-202ENST00000591484 748 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.05■□□□□ 0.48
GRIK1P39086 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 AC092865.6-201ENST00000642101 219 ntBASIC18.05■□□□□ 0.48
GRIK1P39086 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.05■□□□□ 0.48
GRIK1P39086 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
GRIK1P39086 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
GRIK1P39086 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.05■□□□□ 0.48
GRIK1P39086 AC002310.6-201ENST00000624451 1377 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GRIK1P39086 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 LINC00896-202ENST00000609602 2128 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
GRIK1P39086 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.04■□□□□ 0.48
GRIK1P39086 DNAJB3-201ENST00000446806 729 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 SLC25A6P2-201ENST00000497974 877 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.04■□□□□ 0.48
GRIK1P39086 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.04■□□□□ 0.48
GRIK1P39086 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
GRIK1P39086 MIR3687-2-201ENST00000577708 61 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.04■□□□□ 0.48
GRIK1P39086 MTDHP5-201ENST00000598980 586 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 MIR3687-1-201ENST00000614492 61 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 AC004877.2-201ENST00000623941 599 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
GRIK1P39086 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
GRIK1P39086 EGFEM1P-202ENST00000431685 1563 ntBASIC18.04■□□□□ 0.48
GRIK1P39086 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GRIK1P39086 CROCCP2-202ENST00000412962 2773 ntBASIC18.03■□□□□ 0.48
GRIK1P39086 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIK1P39086 BCAR1-209ENST00000546196 1340 ntBASIC18.03■□□□□ 0.48
GRIK1P39086 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
GRIK1P39086 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIK1P39086 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.03■□□□□ 0.48
GRIK1P39086 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
GRIK1P39086 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
GRIK1P39086 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIK1P39086 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.03■□□□□ 0.48
GRIK1P39086 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.03■□□□□ 0.48
GRIK1P39086 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.03■□□□□ 0.48
GRIK1P39086 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.03■□□□□ 0.48
GRIK1P39086 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
GRIK1P39086 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.03■□□□□ 0.48
GRIK1P39086 AC139530.3-201ENST00000620344 690 ntBASIC18.03■□□□□ 0.48
GRIK1P39086 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.03■□□□□ 0.48
GRIK1P39086 AL513190.1-201ENST00000621254 727 ntBASIC18.03■□□□□ 0.48
GRIK1P39086 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms