Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.16■□□□□ 0.34
XRCC1P18887 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
XRCC1P18887 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.16■□□□□ 0.34
XRCC1P18887 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
XRCC1P18887 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
XRCC1P18887 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
XRCC1P18887 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 AC079776.4-201ENST00000511039 504 ntBASIC17.15■□□□□ 0.34
XRCC1P18887 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.15■□□□□ 0.34
XRCC1P18887 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 PCDHA14-201ENST00000506751 2298 ntBASIC17.15■□□□□ 0.34
XRCC1P18887 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.15■□□□□ 0.34
XRCC1P18887 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
XRCC1P18887 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
XRCC1P18887 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
XRCC1P18887 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 SIGLEC16-201ENST00000599858 1437 ntBASIC17.14■□□□□ 0.33
XRCC1P18887 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.14■□□□□ 0.33
XRCC1P18887 PRYP5-201ENST00000451909 266 ntBASIC17.14■□□□□ 0.33
XRCC1P18887 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 AC093909.1-201ENST00000504731 1122 ntBASIC17.14■□□□□ 0.33
XRCC1P18887 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.14■□□□□ 0.33
XRCC1P18887 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 AC073592.5-201ENST00000624854 528 ntBASIC17.14■□□□□ 0.33
XRCC1P18887 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
XRCC1P18887 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.14■□□□□ 0.33
XRCC1P18887 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
XRCC1P18887 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.14■□□□□ 0.33
XRCC1P18887 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC1P18887 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC1P18887 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
XRCC1P18887 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
XRCC1P18887 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC1P18887 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
XRCC1P18887 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms