Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
VTNP04004 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
VTNP04004 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.73■□□□□ 0.59
VTNP04004 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
VTNP04004 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.73■□□□□ 0.59
VTNP04004 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
VTNP04004 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.73■□□□□ 0.59
VTNP04004 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VTNP04004 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.72■□□□□ 0.59
VTNP04004 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.72■□□□□ 0.59
VTNP04004 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.72■□□□□ 0.59
VTNP04004 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.72■□□□□ 0.59
VTNP04004 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.72■□□□□ 0.59
VTNP04004 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.72■□□□□ 0.59
VTNP04004 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.72■□□□□ 0.59
VTNP04004 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.72■□□□□ 0.59
VTNP04004 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.72■□□□□ 0.59
VTNP04004 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VTNP04004 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
VTNP04004 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
VTNP04004 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
VTNP04004 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
VTNP04004 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.71■□□□□ 0.59
VTNP04004 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
VTNP04004 FZD10-202ENST00000539839 3282 ntBASIC18.71■□□□□ 0.59
VTNP04004 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.71■□□□□ 0.59
VTNP04004 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.71■□□□□ 0.59
VTNP04004 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.71■□□□□ 0.59
VTNP04004 AC112191.1-201ENST00000523689 701 ntBASIC18.71■□□□□ 0.59
VTNP04004 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC18.71■□□□□ 0.59
VTNP04004 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.71■□□□□ 0.59
VTNP04004 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.71■□□□□ 0.59
VTNP04004 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.71■□□□□ 0.59
VTNP04004 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.71■□□□□ 0.59
VTNP04004 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
VTNP04004 AL645728.2-201ENST00000641974 660 ntBASIC18.71■□□□□ 0.59
VTNP04004 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VTNP04004 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
VTNP04004 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
VTNP04004 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
VTNP04004 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.7■□□□□ 0.58
VTNP04004 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.7■□□□□ 0.58
VTNP04004 AC116353.5-201ENST00000638148 1699 ntBASIC18.7■□□□□ 0.58
VTNP04004 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VTNP04004 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.7■□□□□ 0.58
VTNP04004 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
VTNP04004 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.7■□□□□ 0.58
VTNP04004 AC140658.5-201ENST00000438532 169 ntBASIC18.7■□□□□ 0.58
VTNP04004 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
VTNP04004 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms