Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 HTR5BP-201ENST00000430851 1154 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.36■■□□□ 1.01
CACNA1FO60840 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.36■■□□□ 1.01
CACNA1FO60840 RARRES2P8-201ENST00000566335 367 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.36■■□□□ 1.01
CACNA1FO60840 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.36■■□□□ 1.01
CACNA1FO60840 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 HLA-A-202ENST00000376806 1854 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.36■■□□□ 1.01
CACNA1FO60840 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 TFAMP1-201ENST00000412727 736 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CACNA1FO60840 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC21.36■■□□□ 1.01
CACNA1FO60840 ACTG1P14-201ENST00000446382 1122 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CACNA1FO60840 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC21.36■■□□□ 1.01
CACNA1FO60840 AC022145.2-201ENST00000598203 171 ntBASIC21.36■■□□□ 1.01
CACNA1FO60840 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.36■■□□□ 1.01
CACNA1FO60840 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC21.36■■□□□ 1.01
CACNA1FO60840 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CACNA1FO60840 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 KRT8P39-201ENST00000396270 1433 ntBASIC21.35■■□□□ 1.01
CACNA1FO60840 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC21.35■■□□□ 1.01
CACNA1FO60840 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC21.35■■□□□ 1.01
CACNA1FO60840 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC21.35■■□□□ 1.01
CACNA1FO60840 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CACNA1FO60840 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
CACNA1FO60840 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CACNA1FO60840 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC21.35■■□□□ 1.01
CACNA1FO60840 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.35■■□□□ 1.01
CACNA1FO60840 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC21.35■■□□□ 1.01
CACNA1FO60840 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 AMT-206ENST00000458307 1860 ntTSL 2 BASIC21.35■■□□□ 1.01
CACNA1FO60840 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
CACNA1FO60840 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC21.35■■□□□ 1.01
CACNA1FO60840 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CACNA1FO60840 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.35■■□□□ 1.01
CACNA1FO60840 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
CACNA1FO60840 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
CACNA1FO60840 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.34■■□□□ 1.01
CACNA1FO60840 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.34■■□□□ 1.01
CACNA1FO60840 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CACNA1FO60840 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CACNA1FO60840 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 AC006277.1-201ENST00000624348 1610 ntBASIC21.34■■□□□ 1.01
CACNA1FO60840 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CACNA1FO60840 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC21.34■■□□□ 1.01
CACNA1FO60840 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 AC074386.1-202ENST00000463561 864 ntBASIC21.34■■□□□ 1.01
CACNA1FO60840 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC21.34■■□□□ 1.01
CACNA1FO60840 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CACNA1FO60840 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.34■■□□□ 1.01
CACNA1FO60840 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.34■■□□□ 1.01
CACNA1FO60840 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC21.34■■□□□ 1.01
CACNA1FO60840 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
CACNA1FO60840 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CACNA1FO60840 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
CACNA1FO60840 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CACNA1FO60840 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms