Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 AC129492.6-201ENST00000611383 1305 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD6O43541 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 AC108860.2-201ENST00000562760 2183 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD6O43541 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD6O43541 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.28■□□□□ 0.36
SMAD6O43541 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 KRT19P2-202ENST00000557173 1012 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.28■□□□□ 0.36
SMAD6O43541 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.28■□□□□ 0.36
SMAD6O43541 AC010327.4-202ENST00000591484 748 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.28■□□□□ 0.36
SMAD6O43541 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.28■□□□□ 0.36
SMAD6O43541 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMAD6O43541 AC025580.3-201ENST00000617932 1424 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 AL023806.1-201ENST00000603994 1649 ntBASIC17.28■□□□□ 0.36
SMAD6O43541 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMAD6O43541 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMAD6O43541 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SMAD6O43541 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
SMAD6O43541 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.27■□□□□ 0.36
SMAD6O43541 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMAD6O43541 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD6O43541 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
SMAD6O43541 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.27■□□□□ 0.36
SMAD6O43541 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.27■□□□□ 0.36
SMAD6O43541 DUX4L17-201ENST00000557360 1267 ntBASIC17.27■□□□□ 0.36
SMAD6O43541 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.27■□□□□ 0.36
SMAD6O43541 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SMAD6O43541 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.27■□□□□ 0.36
SMAD6O43541 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.27■□□□□ 0.36
SMAD6O43541 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SMAD6O43541 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMAD6O43541 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMAD6O43541 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
SMAD6O43541 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.35
SMAD6O43541 AC020916.1-201ENST00000587762 1774 ntBASIC17.27■□□□□ 0.35
SMAD6O43541 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SMAD6O43541 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMAD6O43541 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD6O43541 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SMAD6O43541 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD6O43541 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 RPSAP43-201ENST00000402237 625 ntBASIC17.26■□□□□ 0.35
SMAD6O43541 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
SMAD6O43541 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD6O43541 GPX1P2-201ENST00000429271 606 ntBASIC17.26■□□□□ 0.35
SMAD6O43541 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.26■□□□□ 0.35
SMAD6O43541 AC112482.1-201ENST00000492080 688 ntBASIC17.26■□□□□ 0.35
SMAD6O43541 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.26■□□□□ 0.35
SMAD6O43541 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SMAD6O43541 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SMAD6O43541 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.26■□□□□ 0.35
SMAD6O43541 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.26■□□□□ 0.35
SMAD6O43541 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.26■□□□□ 0.35
SMAD6O43541 AC006538.3-201ENST00000612495 578 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms