Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
UBQLN1Q9UMX0 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 KRT19P2-202ENST00000557173 1012 ntBASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 PDPK2P-202ENST00000562415 1191 ntBASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
UBQLN1Q9UMX0 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 PP12613-201ENST00000424958 2230 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 LINC02012-201ENST00000608206 1725 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 AC025580.3-201ENST00000617932 1424 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MIR1233-2-201ENST00000408138 82 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MIR1233-1-201ENST00000408722 82 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 UPF3AP3-201ENST00000420996 769 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 GPX1P2-201ENST00000429271 606 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 AC010327.4-202ENST00000591484 748 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 GPALPP1-207ENST00000611650 899 ntBASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.35■□□□□ 0.53
UBQLN1Q9UMX0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 FRMD8P1-201ENST00000440433 1524 ntBASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 RPSAP43-201ENST00000402237 625 ntBASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 AL513480.1-201ENST00000451731 511 ntBASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.34■□□□□ 0.53
UBQLN1Q9UMX0 MIR3687-2-201ENST00000577708 61 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms