Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AL049757.1-201ENST00000616842 1596 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AC103564.2-201ENST00000432853 1299 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 TPM4P1-201ENST00000436100 807 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AC079781.3-201ENST00000449110 356 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AD001527.2-201ENST00000622994 785 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 KRT8P10-201ENST00000450021 1447 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 AP005117.1-201ENST00000584346 1413 ntBASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NECTIN3Q9NQS3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 CICP6-201ENST00000457191 2729 ntBASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 AC106795.1-205ENST00000512851 1056 ntBASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 AC109462.3-201ENST00000573934 613 ntBASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 AP000867.4-201ENST00000641616 219 ntBASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NECTIN3Q9NQS3 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
NECTIN3Q9NQS3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 MTDHP3-201ENST00000594186 672 ntBASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 AC008608.2-201ENST00000606089 416 ntBASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 AL031008.1-201ENST00000619963 541 ntBASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
NECTIN3Q9NQS3 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NECTIN3Q9NQS3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 330.6 ms