Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.1■□□□□ 0.65
VTA1Q9NP79 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
VTA1Q9NP79 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
VTA1Q9NP79 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 BSG-215ENST00000618006 1329 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 GPS2P2-201ENST00000430745 888 ntBASIC19.09■□□□□ 0.65
VTA1Q9NP79 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 LINC01225-203ENST00000563550 1244 ntBASIC19.09■□□□□ 0.65
VTA1Q9NP79 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
VTA1Q9NP79 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.09■□□□□ 0.65
VTA1Q9NP79 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VTA1Q9NP79 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
VTA1Q9NP79 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
VTA1Q9NP79 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 IGHV3-62-201ENST00000520057 340 ntBASIC19.08■□□□□ 0.64
VTA1Q9NP79 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 MIR3909-201ENST00000579518 119 ntBASIC19.08■□□□□ 0.64
VTA1Q9NP79 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
VTA1Q9NP79 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
VTA1Q9NP79 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 RNU1-129P-201ENST00000384064 167 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 AC069262.1-201ENST00000539058 672 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 AC051619.7-201ENST00000568314 623 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 U1.21-201ENST00000580816 167 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 AC084121.4-201ENST00000641598 221 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 AF228730.8-201ENST00000642140 221 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 WASH6P-202ENST00000359512 1437 ntBASIC19.07■□□□□ 0.64
VTA1Q9NP79 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
VTA1Q9NP79 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
VTA1Q9NP79 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms