Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 CROCCP2-202ENST00000412962 2773 ntBASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.23■□□□□ 0.51
PAAF1Q9BRP4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 AC112191.1-201ENST00000523689 701 ntBASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 AL645728.2-201ENST00000641974 660 ntBASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 AC016396.2-201ENST00000562575 1417 ntBASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.22■□□□□ 0.51
PAAF1Q9BRP4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 AL121761.2-201ENST00000598007 1648 ntBASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 RFPL4AP1-201ENST00000530883 850 ntBASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PAAF1Q9BRP4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
PAAF1Q9BRP4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 SLC22A20-204ENST00000530038 1673 ntBASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 AL355306.1-201ENST00000415580 579 ntBASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 KRT8P48-201ENST00000515599 1220 ntBASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 DUX4L17-201ENST00000557360 1267 ntBASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 AC093028.1-201ENST00000622998 982 ntBASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.2■□□□□ 0.5
PAAF1Q9BRP4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms