Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
EBF4Q9BQW3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 KRT17P2-201ENST00000300992 1314 ntBASIC16.77■□□□□ 0.28
EBF4Q9BQW3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 AP003733.1-201ENST00000491725 852 ntBASIC16.77■□□□□ 0.28
EBF4Q9BQW3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
EBF4Q9BQW3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 AL391256.1-201ENST00000443260 1855 ntBASIC16.77■□□□□ 0.27
EBF4Q9BQW3 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
EBF4Q9BQW3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 MMP23A-201ENST00000234610 1017 ntBASIC16.76■□□□□ 0.27
EBF4Q9BQW3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.76■□□□□ 0.27
EBF4Q9BQW3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
EBF4Q9BQW3 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms