Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 PRYP5-201ENST00000451909 266 ntBASIC16.27■□□□□ 0.2
TM9SF4Q92544 BX005266.1-201ENST00000473402 457 ntBASIC16.27■□□□□ 0.2
TM9SF4Q92544 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 AC073592.4-201ENST00000623827 446 ntBASIC16.27■□□□□ 0.2
TM9SF4Q92544 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.27■□□□□ 0.2
TM9SF4Q92544 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TM9SF4Q92544 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TM9SF4Q92544 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.27■□□□□ 0.19
TM9SF4Q92544 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.27■□□□□ 0.19
TM9SF4Q92544 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
TM9SF4Q92544 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TM9SF4Q92544 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SIGLEC16-201ENST00000599858 1437 ntBASIC16.26■□□□□ 0.19
TM9SF4Q92544 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 AL023806.1-201ENST00000603994 1649 ntBASIC16.26■□□□□ 0.19
TM9SF4Q92544 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TM9SF4Q92544 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TM9SF4Q92544 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AP002414.3-201ENST00000589352 1468 ntBASIC16.25■□□□□ 0.19
TM9SF4Q92544 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TM9SF4Q92544 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TM9SF4Q92544 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms