Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 AL024508.2-201ENST00000607749 1894 ntBASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CHRFAM7AQ494W8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 AC106730.1-201ENST00000566722 1090 ntBASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 TP73-AS1-207ENST00000624167 988 ntBASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CHRFAM7AQ494W8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 MIR940-201ENST00000401276 94 ntBASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 AC104390.1-201ENST00000555663 520 ntBASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 ZNF259P1-201ENST00000407656 1365 ntBASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CHRFAM7AQ494W8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 POM121L3P-201ENST00000419331 1163 ntBASIC15.09■□□□□ 0.01
CHRFAM7AQ494W8 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms