Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
XPAP23025 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 MIR940-201ENST00000401276 94 ntBASIC17.36■□□□□ 0.37
XPAP23025 RPS15P9-201ENST00000494093 319 ntBASIC17.36■□□□□ 0.37
XPAP23025 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.36■□□□□ 0.37
XPAP23025 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.36■□□□□ 0.37
XPAP23025 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.36■□□□□ 0.37
XPAP23025 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 GPR89P-201ENST00000407924 1495 ntBASIC17.36■□□□□ 0.37
XPAP23025 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 FER1L4-210ENST00000615531 5998 ntBASIC17.36■□□□□ 0.37
XPAP23025 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.36■□□□□ 0.37
XPAP23025 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
XPAP23025 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
XPAP23025 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 PMS2P1-201ENST00000431037 1228 ntBASIC17.35■□□□□ 0.37
XPAP23025 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 AC108751.1-201ENST00000490852 363 ntBASIC17.35■□□□□ 0.37
XPAP23025 KRT18P58-201ENST00000527480 1120 ntBASIC17.35■□□□□ 0.37
XPAP23025 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 AL133373.2-201ENST00000623187 2828 ntBASIC17.35■□□□□ 0.37
XPAP23025 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
XPAP23025 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
XPAP23025 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
XPAP23025 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
XPAP23025 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.34■□□□□ 0.37
XPAP23025 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.34■□□□□ 0.37
XPAP23025 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 AC068880.1-201ENST00000507289 2297 ntBASIC17.34■□□□□ 0.37
XPAP23025 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.34■□□□□ 0.37
XPAP23025 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.34■□□□□ 0.37
XPAP23025 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
XPAP23025 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.34■□□□□ 0.37
XPAP23025 AC145285.3-201ENST00000564603 959 ntBASIC17.34■□□□□ 0.37
XPAP23025 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms