Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.66■□□□□ 0.1
CD53P19397 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC15.66■□□□□ 0.1
CD53P19397 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 SLC25A1P1-201ENST00000528351 927 ntBASIC15.66■□□□□ 0.1
CD53P19397 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC15.66■□□□□ 0.1
CD53P19397 AC011840.4-201ENST00000578471 627 ntBASIC15.66■□□□□ 0.1
CD53P19397 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 PCDHB19P-201ENST00000570871 2371 ntBASIC15.66■□□□□ 0.1
CD53P19397 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.66■□□□□ 0.1
CD53P19397 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CD53P19397 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 AC009949.1-201ENST00000623048 1830 ntBASIC15.66■□□□□ 0.1
CD53P19397 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CD53P19397 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 KRT89P-201ENST00000620027 1478 ntBASIC15.65■□□□□ 0.1
CD53P19397 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 AC018695.7-201ENST00000624587 2492 ntBASIC15.65■□□□□ 0.1
CD53P19397 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.65■□□□□ 0.1
CD53P19397 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 AL031284.1-201ENST00000419297 478 ntBASIC15.65■□□□□ 0.1
CD53P19397 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.65■□□□□ 0.1
CD53P19397 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC15.65■□□□□ 0.1
CD53P19397 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.65■□□□□ 0.1
CD53P19397 ABBA01031661.1-201ENST00000634362 1253 ntBASIC15.65■□□□□ 0.1
CD53P19397 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.65■□□□□ 0.1
CD53P19397 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC15.65■□□□□ 0.1
CD53P19397 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CD53P19397 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.64■□□□□ 0.1
CD53P19397 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 AC116353.5-201ENST00000638148 1699 ntBASIC15.64■□□□□ 0.09
CD53P19397 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.64■□□□□ 0.09
CD53P19397 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15.64■□□□□ 0.09
CD53P19397 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.64■□□□□ 0.09
CD53P19397 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CD53P19397 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.64■□□□□ 0.09
CD53P19397 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.64■□□□□ 0.09
CD53P19397 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.09
CD53P19397 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CD53P19397 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.64■□□□□ 0.09
CD53P19397 KRT18P67-201ENST00000432816 1264 ntBASIC15.64■□□□□ 0.09
CD53P19397 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.64■□□□□ 0.09
CD53P19397 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.64■□□□□ 0.09
CD53P19397 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.64■□□□□ 0.09
CD53P19397 KRT18P58-201ENST00000527480 1120 ntBASIC15.64■□□□□ 0.09
CD53P19397 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.64■□□□□ 0.09
CD53P19397 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.64■□□□□ 0.09
CD53P19397 AL591684.3-201ENST00000605187 298 ntBASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms