Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFRAP16234 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDGFRAP16234 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
PDGFRAP16234 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFRAP16234 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFRAP16234 SCARNA2-201ENST00000458748 420 ntBASIC18.05■□□□□ 0.48
PDGFRAP16234 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PDGFRAP16234 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.05■□□□□ 0.48
PDGFRAP16234 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.05■□□□□ 0.48
PDGFRAP16234 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PDGFRAP16234 AC064862.7-201ENST00000604520 867 ntBASIC18.05■□□□□ 0.48
PDGFRAP16234 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.05■□□□□ 0.48
PDGFRAP16234 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.05■□□□□ 0.48
PDGFRAP16234 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PDGFRAP16234 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
PDGFRAP16234 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFRAP16234 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFRAP16234 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFRAP16234 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.04■□□□□ 0.48
PDGFRAP16234 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
PDGFRAP16234 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PDGFRAP16234 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFRAP16234 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
PDGFRAP16234 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 GPR89P-201ENST00000407924 1495 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC18.03■□□□□ 0.48
PDGFRAP16234 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PDGFRAP16234 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 KRT18P67-201ENST00000432816 1264 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 AF186996.4-201ENST00000467186 377 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 AL662844.1-201ENST00000546340 181 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 MTDHP4-201ENST00000600287 670 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 AC148477.8-201ENST00000624298 468 ntBASIC18.03■□□□□ 0.48
PDGFRAP16234 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.03■□□□□ 0.48
PDGFRAP16234 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PDGFRAP16234 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PDGFRAP16234 PCDHA12-202ENST00000613593 2588 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms