Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.97■□□□□ 0.31
CAPN1P07384 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN1P07384 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.97■□□□□ 0.31
CAPN1P07384 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 TP73-AS1-210ENST00000637775 1455 ntBASIC16.97■□□□□ 0.31
CAPN1P07384 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 AC116353.5-201ENST00000638148 1699 ntBASIC16.97■□□□□ 0.31
CAPN1P07384 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CAPN1P07384 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CAPN1P07384 HLA-A-201ENST00000376802 1334 ntBASIC16.96■□□□□ 0.31
CAPN1P07384 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.96■□□□□ 0.31
CAPN1P07384 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CAPN1P07384 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPN1P07384 AC007967.3-201ENST00000434308 558 ntBASIC16.96■□□□□ 0.31
CAPN1P07384 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPN1P07384 AC132008.2-207ENST00000454517 770 ntBASIC16.96■□□□□ 0.31
CAPN1P07384 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CAPN1P07384 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.96■□□□□ 0.31
CAPN1P07384 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CAPN1P07384 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.96■□□□□ 0.31
CAPN1P07384 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CAPN1P07384 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CAPN1P07384 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.96■□□□□ 0.3
CAPN1P07384 AC125634.1-201ENST00000438758 1403 ntBASIC16.96■□□□□ 0.3
CAPN1P07384 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.96■□□□□ 0.3
CAPN1P07384 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.96■□□□□ 0.3
CAPN1P07384 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.95■□□□□ 0.3
CAPN1P07384 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.95■□□□□ 0.3
CAPN1P07384 RNA5SP419-201ENST00000515908 135 ntBASIC16.95■□□□□ 0.3
CAPN1P07384 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.95■□□□□ 0.3
CAPN1P07384 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CAPN1P07384 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CAPN1P07384 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CAPN1P07384 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CAPN1P07384 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms