Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MBD4O95243 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 LINC02012-201ENST00000608206 1725 ntBASIC20.44■□□□□ 0.86
MBD4O95243 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.44■□□□□ 0.86
MBD4O95243 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC20.44■□□□□ 0.86
MBD4O95243 FRMD8P1-201ENST00000440433 1524 ntBASIC20.44■□□□□ 0.86
MBD4O95243 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MBD4O95243 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.44■□□□□ 0.86
MBD4O95243 HNRNPA1P28-201ENST00000424481 961 ntBASIC20.44■□□□□ 0.86
MBD4O95243 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 CXCL1P1-201ENST00000502804 216 ntBASIC20.44■□□□□ 0.86
MBD4O95243 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.44■□□□□ 0.86
MBD4O95243 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.44■□□□□ 0.86
MBD4O95243 AL023806.1-201ENST00000603994 1649 ntBASIC20.44■□□□□ 0.86
MBD4O95243 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.44■□□□□ 0.86
MBD4O95243 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD4O95243 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD4O95243 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD4O95243 AC092053.1-201ENST00000605787 1936 ntBASIC20.43■□□□□ 0.86
MBD4O95243 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD4O95243 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD4O95243 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 RHOQP3-201ENST00000437982 621 ntBASIC20.43■□□□□ 0.86
MBD4O95243 FAM185BP-201ENST00000443595 716 ntBASIC20.43■□□□□ 0.86
MBD4O95243 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
MBD4O95243 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.43■□□□□ 0.86
MBD4O95243 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.43■□□□□ 0.86
MBD4O95243 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD4O95243 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
MBD4O95243 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 AC106820.2-201ENST00000563775 3264 ntBASIC20.43■□□□□ 0.86
MBD4O95243 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD4O95243 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC20.43■□□□□ 0.86
MBD4O95243 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD4O95243 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 AC090340.1-201ENST00000620778 4980 ntBASIC20.42■□□□□ 0.86
MBD4O95243 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 YBX2P1-201ENST00000394192 760 ntBASIC20.42■□□□□ 0.86
MBD4O95243 KRT18P13-201ENST00000400056 1290 ntBASIC20.42■□□□□ 0.86
MBD4O95243 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
MBD4O95243 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.42■□□□□ 0.86
MBD4O95243 DUX4L17-201ENST00000557360 1267 ntBASIC20.42■□□□□ 0.86
MBD4O95243 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 AC002347.1-201ENST00000569543 541 ntBASIC20.42■□□□□ 0.86
MBD4O95243 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 REXO1L3P-201ENST00000622202 1288 ntBASIC20.42■□□□□ 0.86
MBD4O95243 AC004877.2-201ENST00000623941 599 ntBASIC20.42■□□□□ 0.86
MBD4O95243 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
MBD4O95243 AL645608.8-201ENST00000606034 2086 ntBASIC20.42■□□□□ 0.86
MBD4O95243 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD4O95243 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.42■□□□□ 0.86
MBD4O95243 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20.42■□□□□ 0.86
MBD4O95243 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.42■□□□□ 0.86
MBD4O95243 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
MBD4O95243 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
MBD4O95243 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MBD4O95243 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MBD4O95243 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms