Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC055717.3-201ENST00000622967 595 ntBASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.93■□□□□ 0.3
TMX2-CTNND1H3BSU7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC004967.1-201ENST00000453589 447 ntBASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC108751.1-201ENST00000490852 363 ntBASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AP001160.2-201ENST00000596071 487 ntBASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC073592.5-201ENST00000624854 528 ntBASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TMX2-CTNND1H3BSU7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC138028.4-201ENST00000564984 1845 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 KRT8P47-201ENST00000604727 1398 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AP001094.4-201ENST00000579008 2176 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC010460.3-201ENST00000511359 1579 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC007967.2-201ENST00000432613 625 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 AL139424.1-201ENST00000607572 797 ntBASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
TMX2-CTNND1H3BSU7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms