Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.37■□□□□ 0.21
MMP11P24347 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP11P24347 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 STK25P1-201ENST00000585406 838 ntBASIC16.37■□□□□ 0.21
MMP11P24347 AC140113.2-201ENST00000604370 208 ntBASIC16.37■□□□□ 0.21
MMP11P24347 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
MMP11P24347 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 AC148477.5-201ENST00000625164 1645 ntBASIC16.37■□□□□ 0.21
MMP11P24347 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.37■□□□□ 0.21
MMP11P24347 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MMP11P24347 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MMP11P24347 NCF1C-201ENST00000438382 1427 ntBASIC16.36■□□□□ 0.21
MMP11P24347 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.36■□□□□ 0.21
MMP11P24347 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 AC004706.3-202ENST00000621574 984 ntBASIC16.36■□□□□ 0.21
MMP11P24347 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MMP11P24347 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.36■□□□□ 0.21
MMP11P24347 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MMP11P24347 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.35■□□□□ 0.21
MMP11P24347 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 MYCLP1-201ENST00000372451 1075 ntBASIC16.35■□□□□ 0.21
MMP11P24347 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.35■□□□□ 0.21
MMP11P24347 AC009947.1-201ENST00000444350 727 ntBASIC16.35■□□□□ 0.21
MMP11P24347 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 STK19B-204ENST00000512515 211 ntBASIC16.35■□□□□ 0.21
MMP11P24347 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
MMP11P24347 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.35■□□□□ 0.21
MMP11P24347 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
MMP11P24347 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MMP11P24347 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 AC084018.2-201ENST00000613093 2607 ntBASIC16.34■□□□□ 0.21
MMP11P24347 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
MMP11P24347 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.34■□□□□ 0.21
MMP11P24347 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MMP11P24347 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms