Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFBP01127 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFBP01127 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFBP01127 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFBP01127 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFBP01127 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDGFBP01127 FAM86MP-201ENST00000340703 885 ntBASIC17.13■□□□□ 0.33
PDGFBP01127 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFBP01127 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.13■□□□□ 0.33
PDGFBP01127 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFBP01127 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 CHCHD2P3-201ENST00000603038 451 ntBASIC17.13■□□□□ 0.33
PDGFBP01127 AC008494.3-201ENST00000606615 944 ntBASIC17.13■□□□□ 0.33
PDGFBP01127 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
PDGFBP01127 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFBP01127 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDGFBP01127 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PDGFBP01127 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFBP01127 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFBP01127 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFBP01127 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
PDGFBP01127 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.12■□□□□ 0.33
PDGFBP01127 AC142381.1-201ENST00000426099 345 ntBASIC17.12■□□□□ 0.33
PDGFBP01127 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.12■□□□□ 0.33
PDGFBP01127 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 AL031055.1-201ENST00000606362 631 ntBASIC17.12■□□□□ 0.33
PDGFBP01127 TEX28P1-201ENST00000613479 1221 ntBASIC17.12■□□□□ 0.33
PDGFBP01127 TEX28P2-201ENST00000617764 1221 ntBASIC17.12■□□□□ 0.33
PDGFBP01127 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
PDGFBP01127 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFBP01127 AC073592.3-201ENST00000625118 1834 ntBASIC17.12■□□□□ 0.33
PDGFBP01127 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFBP01127 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
PDGFBP01127 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 RNU1-129P-201ENST00000384064 167 ntBASIC17.11■□□□□ 0.33
PDGFBP01127 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 AC119751.2-201ENST00000504529 210 ntBASIC17.11■□□□□ 0.33
PDGFBP01127 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.11■□□□□ 0.33
PDGFBP01127 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 AC106886.1-201ENST00000568660 600 ntBASIC17.11■□□□□ 0.33
PDGFBP01127 U1.21-201ENST00000580816 167 ntBASIC17.11■□□□□ 0.33
PDGFBP01127 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.11■□□□□ 0.33
PDGFBP01127 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.11■□□□□ 0.33
PDGFBP01127 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
PDGFBP01127 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
PDGFBP01127 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFBP01127 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFBP01127 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PDGFBP01127 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms