Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
VPS16Q9H269 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
VPS16Q9H269 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
VPS16Q9H269 CR559946.2-201ENST00000623684 991 ntBASIC26.53■■□□□ 1.84
VPS16Q9H269 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
VPS16Q9H269 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC26.52■■□□□ 1.84
VPS16Q9H269 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS16Q9H269 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.52■■□□□ 1.84
VPS16Q9H269 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
VPS16Q9H269 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
VPS16Q9H269 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.51■■□□□ 1.83
VPS16Q9H269 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
VPS16Q9H269 AC093323.1-202ENST00000635031 2045 ntBASIC26.51■■□□□ 1.83
VPS16Q9H269 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
VPS16Q9H269 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS16Q9H269 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC26.5■■□□□ 1.83
VPS16Q9H269 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS16Q9H269 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
VPS16Q9H269 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.5■■□□□ 1.83
VPS16Q9H269 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS16Q9H269 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
VPS16Q9H269 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS16Q9H269 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.49■■□□□ 1.83
VPS16Q9H269 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
VPS16Q9H269 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC26.49■■□□□ 1.83
VPS16Q9H269 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS16Q9H269 MED17-227ENST00000640521 2047 ntTSL 5 BASIC26.48■■□□□ 1.83
VPS16Q9H269 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS16Q9H269 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS16Q9H269 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
VPS16Q9H269 ABHD17AP4-201ENST00000411545 909 ntBASIC26.48■■□□□ 1.83
VPS16Q9H269 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
VPS16Q9H269 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
VPS16Q9H269 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
VPS16Q9H269 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.47■■□□□ 1.83
VPS16Q9H269 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS16Q9H269 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.46■■□□□ 1.83
VPS16Q9H269 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
VPS16Q9H269 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
VPS16Q9H269 AC022211.4-201ENST00000625094 2161 ntBASIC26.46■■□□□ 1.83
VPS16Q9H269 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC26.46■■□□□ 1.83
VPS16Q9H269 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
VPS16Q9H269 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VPS16Q9H269 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.45■■□□□ 1.82
VPS16Q9H269 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
VPS16Q9H269 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.45■■□□□ 1.82
VPS16Q9H269 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS16Q9H269 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
VPS16Q9H269 AC142381.3-201ENST00000568208 1670 ntBASIC26.44■■□□□ 1.82
VPS16Q9H269 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS16Q9H269 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.44■■□□□ 1.82
VPS16Q9H269 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
VPS16Q9H269 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.44■■□□□ 1.82
VPS16Q9H269 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
VPS16Q9H269 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
VPS16Q9H269 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC26.44■■□□□ 1.82
VPS16Q9H269 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.44■■□□□ 1.82
VPS16Q9H269 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.44■■□□□ 1.82
VPS16Q9H269 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS16Q9H269 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
VPS16Q9H269 MIR3648-2-201ENST00000581792 180 ntBASIC26.43■■□□□ 1.82
VPS16Q9H269 MIR3648-1-201ENST00000615959 180 ntBASIC26.43■■□□□ 1.82
VPS16Q9H269 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
VPS16Q9H269 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
VPS16Q9H269 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.43■■□□□ 1.82
VPS16Q9H269 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC26.43■■□□□ 1.82
VPS16Q9H269 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.42■■□□□ 1.82
VPS16Q9H269 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS16Q9H269 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
VPS16Q9H269 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
VPS16Q9H269 AC138932.3-201ENST00000567634 1902 ntBASIC26.41■■□□□ 1.82
VPS16Q9H269 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.41■■□□□ 1.82
VPS16Q9H269 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.41■■□□□ 1.82
VPS16Q9H269 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
VPS16Q9H269 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.41■■□□□ 1.82
VPS16Q9H269 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS16Q9H269 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
VPS16Q9H269 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.4■■□□□ 1.82
VPS16Q9H269 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.4■■□□□ 1.82
VPS16Q9H269 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
VPS16Q9H269 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
VPS16Q9H269 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS16Q9H269 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS16Q9H269 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
VPS16Q9H269 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
VPS16Q9H269 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.39■■□□□ 1.82
VPS16Q9H269 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
VPS16Q9H269 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS16Q9H269 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS16Q9H269 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
VPS16Q9H269 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS16Q9H269 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
VPS16Q9H269 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS16Q9H269 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
VPS16Q9H269 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS16Q9H269 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC26.36■■□□□ 1.81
VPS16Q9H269 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS16Q9H269 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
VPS16Q9H269 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.36■■□□□ 1.81
VPS16Q9H269 AC016575.1-201ENST00000607026 382 ntBASIC26.36■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms