Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
SynbQ8BI41 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
SynbQ8BI41 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.77■□□□□ 0.92
SynbQ8BI41 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SynbQ8BI41 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SynbQ8BI41 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.76■□□□□ 0.91
SynbQ8BI41 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SynbQ8BI41 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.76■□□□□ 0.91
SynbQ8BI41 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.76■□□□□ 0.91
SynbQ8BI41 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SynbQ8BI41 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.76■□□□□ 0.91
SynbQ8BI41 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.76■□□□□ 0.91
SynbQ8BI41 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.76■□□□□ 0.91
SynbQ8BI41 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.75■□□□□ 0.91
SynbQ8BI41 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SynbQ8BI41 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SynbQ8BI41 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.74■□□□□ 0.91
SynbQ8BI41 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynbQ8BI41 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SynbQ8BI41 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SynbQ8BI41 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SynbQ8BI41 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
SynbQ8BI41 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.72■□□□□ 0.91
SynbQ8BI41 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.72■□□□□ 0.91
SynbQ8BI41 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynbQ8BI41 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SynbQ8BI41 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.71■□□□□ 0.91
SynbQ8BI41 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.71■□□□□ 0.91
SynbQ8BI41 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.71■□□□□ 0.91
SynbQ8BI41 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.71■□□□□ 0.91
SynbQ8BI41 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SynbQ8BI41 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SynbQ8BI41 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SynbQ8BI41 Gm45102-201ENSMUST00000207427 857 ntBASIC20.7■□□□□ 0.9
SynbQ8BI41 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SynbQ8BI41 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SynbQ8BI41 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SynbQ8BI41 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SynbQ8BI41 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.68■□□□□ 0.9
SynbQ8BI41 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SynbQ8BI41 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynbQ8BI41 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynbQ8BI41 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SynbQ8BI41 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.67■□□□□ 0.9
SynbQ8BI41 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.67■□□□□ 0.9
SynbQ8BI41 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
SynbQ8BI41 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynbQ8BI41 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.67■□□□□ 0.9
SynbQ8BI41 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SynbQ8BI41 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SynbQ8BI41 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.66■□□□□ 0.9
SynbQ8BI41 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.66■□□□□ 0.9
SynbQ8BI41 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SynbQ8BI41 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SynbQ8BI41 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.66■□□□□ 0.9
SynbQ8BI41 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SynbQ8BI41 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SynbQ8BI41 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.65■□□□□ 0.9
SynbQ8BI41 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SynbQ8BI41 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SynbQ8BI41 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SynbQ8BI41 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SynbQ8BI41 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SynbQ8BI41 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SynbQ8BI41 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynbQ8BI41 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynbQ8BI41 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SynbQ8BI41 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.63■□□□□ 0.89
SynbQ8BI41 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SynbQ8BI41 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms