Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml4Q3LRV9 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Treml4Q3LRV9 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Treml4Q3LRV9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.61■□□□□ 0.89
Treml4Q3LRV9 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.61■□□□□ 0.89
Treml4Q3LRV9 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Treml4Q3LRV9 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Gm10232-201ENSMUST00000089221 720 ntBASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.6■□□□□ 0.89
Treml4Q3LRV9 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Treml4Q3LRV9 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.59■□□□□ 0.89
Treml4Q3LRV9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.59■□□□□ 0.89
Treml4Q3LRV9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Treml4Q3LRV9 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Treml4Q3LRV9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Treml4Q3LRV9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Treml4Q3LRV9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Treml4Q3LRV9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Treml4Q3LRV9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.58■□□□□ 0.89
Treml4Q3LRV9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Treml4Q3LRV9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Treml4Q3LRV9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.58■□□□□ 0.88
Treml4Q3LRV9 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml4Q3LRV9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Treml4Q3LRV9 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml4Q3LRV9 Etf1-202ENSMUST00000180351 108 ntBASIC20.55■□□□□ 0.88
Treml4Q3LRV9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml4Q3LRV9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml4Q3LRV9 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Treml4Q3LRV9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Treml4Q3LRV9 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.53■□□□□ 0.88
Treml4Q3LRV9 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml4Q3LRV9 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.53■□□□□ 0.88
Treml4Q3LRV9 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Treml4Q3LRV9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml4Q3LRV9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Treml4Q3LRV9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml4Q3LRV9 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml4Q3LRV9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Treml4Q3LRV9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Treml4Q3LRV9 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.48■□□□□ 0.87
Treml4Q3LRV9 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml4Q3LRV9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml4Q3LRV9 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml4Q3LRV9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Treml4Q3LRV9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml4Q3LRV9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Treml4Q3LRV9 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms