Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf9P20334 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf9P20334 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.61■□□□□ 0.41
Tnfrsf9P20334 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf9P20334 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf9P20334 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf9P20334 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.59■□□□□ 0.41
Tnfrsf9P20334 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf9P20334 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf9P20334 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.58■□□□□ 0.41
Tnfrsf9P20334 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf9P20334 Gm45444-201ENSMUST00000211394 898 ntBASIC17.58■□□□□ 0.4
Tnfrsf9P20334 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf9P20334 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf9P20334 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf9P20334 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf9P20334 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf9P20334 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf9P20334 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf9P20334 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf9P20334 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.56■□□□□ 0.4
Tnfrsf9P20334 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfrsf9P20334 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf9P20334 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf9P20334 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Tnfrsf9P20334 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf9P20334 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Tnfrsf9P20334 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Tnfrsf9P20334 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfrsf9P20334 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfrsf9P20334 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.51■□□□□ 0.39
Tnfrsf9P20334 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfrsf9P20334 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.5■□□□□ 0.39
Tnfrsf9P20334 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf9P20334 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfrsf9P20334 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.49■□□□□ 0.39
Tnfrsf9P20334 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.49■□□□□ 0.39
Tnfrsf9P20334 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfrsf9P20334 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfrsf9P20334 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfrsf9P20334 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfrsf9P20334 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms