Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-3A0A075B695 Gm6934-201ENSMUST00000194780 1905 ntBASIC15.56■□□□□ 0.08
Trav9d-3A0A075B695 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-3A0A075B695 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav9d-3A0A075B695 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Trav9d-3A0A075B695 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav9d-3A0A075B695 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Scarna2-201ENSMUST00000157560 414 ntBASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav9d-3A0A075B695 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Trav9d-3A0A075B695 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Gm9806-201ENSMUST00000051080 552 ntBASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav9d-3A0A075B695 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-3A0A075B695 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-3A0A075B695 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Trav9d-3A0A075B695 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-3A0A075B695 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav9d-3A0A075B695 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Gm16437-201ENSMUST00000025669 507 ntBASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Trav9d-3A0A075B695 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.5■□□□□ 0.07
Trav9d-3A0A075B695 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Gm11687-201ENSMUST00000118911 886 ntBASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trav9d-3A0A075B695 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trav9d-3A0A075B695 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trav9d-3A0A075B695 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav9d-3A0A075B695 Gm7199-201ENSMUST00000118327 1485 ntBASIC15.46■□□□□ 0.06
Trav9d-3A0A075B695 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms