Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 KLF4P1-201ENST00000412782 1185 ntBASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 STK19B-204ENST00000512515 211 ntBASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 RNA5SP415-201ENST00000517246 115 ntBASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 MTDHP4-201ENST00000600287 670 ntBASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
PCDHB11Q9Y5F2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 AC034105.1-201ENST00000563488 319 ntBASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 NKAPP1-205ENST00000585790 367 ntBASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 AC010327.4-202ENST00000591484 748 ntBASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 AC132938.5-201ENST00000624980 1813 ntBASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHB11Q9Y5F2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHB11Q9Y5F2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 LAGE3P1-201ENST00000425356 484 ntBASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 AC025062.2-201ENST00000605477 670 ntBASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHB11Q9Y5F2 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms