Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
CCNL1Q9UK58 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 PTPA-220ENST00000436883 532 ntTSL 4 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 CDK4-206ENST00000549606 558 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 AC003101.2-201ENST00000612557 442 ntBASIC21.7■■□□□ 1.06
CCNL1Q9UK58 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 FLJ13224-201ENST00000313737 1514 ntBASIC21.7■■□□□ 1.06
CCNL1Q9UK58 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CCNL1Q9UK58 GRAMD4P3-201ENST00000621665 1669 ntBASIC21.69■■□□□ 1.06
CCNL1Q9UK58 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 GPR53P-205ENST00000457298 1084 ntBASIC21.69■■□□□ 1.06
CCNL1Q9UK58 REEP4-207ENST00000523293 913 ntTSL 3 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 MPI-209ENST00000564003 1195 ntTSL 2 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RARRES2P9-201ENST00000565168 469 ntBASIC21.69■■□□□ 1.06
CCNL1Q9UK58 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCNL1Q9UK58 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 TP53TG3HP-202ENST00000569755 579 ntBASIC21.68■■□□□ 1.06
CCNL1Q9UK58 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC21.68■■□□□ 1.06
CCNL1Q9UK58 WT1-AS_2.1-201ENST00000613208 137 ntBASIC21.68■■□□□ 1.06
CCNL1Q9UK58 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 NARF-206ENST00000457415 1668 ntTSL 5 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
CCNL1Q9UK58 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 SLC22A20-204ENST00000530038 1673 ntBASIC21.67■■□□□ 1.06
CCNL1Q9UK58 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 AC142381.1-201ENST00000426099 345 ntBASIC21.67■■□□□ 1.06
CCNL1Q9UK58 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 MIR3909-201ENST00000579518 119 ntBASIC21.67■■□□□ 1.06
CCNL1Q9UK58 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC21.67■■□□□ 1.06
CCNL1Q9UK58 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms