Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ECHDC1Q9NTX5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 FDX1P1-201ENST00000449115 551 ntBASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AP001005.1-201ENST00000571755 1248 ntBASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 LTB4R2-202ENST00000528054 3092 ntBASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.96■□□□□ 0.95
ECHDC1Q9NTX5 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ECHDC1Q9NTX5 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ECHDC1Q9NTX5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 TERC-201ENST00000602385 541 ntBASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 AL356488.2-201ENST00000602755 427 ntBASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 AC243591.1-201ENST00000452967 1364 ntBASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ECHDC1Q9NTX5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 RPS15P9-201ENST00000494093 319 ntBASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ECHDC1Q9NTX5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
ECHDC1Q9NTX5 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
ECHDC1Q9NTX5 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC1Q9NTX5 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ECHDC1Q9NTX5 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms