Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20■□□□□ 0.79
CCDC17Q96LX7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20■□□□□ 0.79
CCDC17Q96LX7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20■□□□□ 0.79
CCDC17Q96LX7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AC092919.2-201ENST00000623631 1645 ntBASIC19.99■□□□□ 0.79
CCDC17Q96LX7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AC002056.1-201ENST00000395613 760 ntBASIC19.99■□□□□ 0.79
CCDC17Q96LX7 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 CNN2P11-201ENST00000429351 262 ntBASIC19.99■□□□□ 0.79
CCDC17Q96LX7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AC140658.5-201ENST00000438532 169 ntBASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.99■□□□□ 0.79
CCDC17Q96LX7 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CCDC17Q96LX7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 PMS2P2-201ENST00000425039 1128 ntBASIC19.97■□□□□ 0.79
CCDC17Q96LX7 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AP000344.2-201ENST00000512987 629 ntBASIC19.97■□□□□ 0.79
CCDC17Q96LX7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 AL121761.2-201ENST00000598007 1648 ntBASIC19.97■□□□□ 0.79
CCDC17Q96LX7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC17Q96LX7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms