Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 DNAJB3-201ENST00000446806 729 ntBASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 MIR3687-2-201ENST00000577708 61 ntBASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 MIR3687-1-201ENST00000614492 61 ntBASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 BCAR1-209ENST00000546196 1340 ntBASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SWSAP1Q6NVH7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 SLC25A1P3-201ENST00000395415 828 ntBASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 MCCD1P2-201ENST00000423228 335 ntBASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 FAM185BP-201ENST00000443595 716 ntBASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SWSAP1Q6NVH7 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 LINC00896-202ENST00000609602 2128 ntBASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 AC025580.3-201ENST00000617932 1424 ntBASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 FZD10-202ENST00000539839 3282 ntBASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SWSAP1Q6NVH7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 CROCCP2-202ENST00000412962 2773 ntBASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 KRT19P2-202ENST00000557173 1012 ntBASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC19.11■□□□□ 0.65
SWSAP1Q6NVH7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms