Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RNF43Q68DV7 AC009949.1-201ENST00000623048 1830 ntBASIC18.12■□□□□ 0.49
RNF43Q68DV7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RNF43Q68DV7 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RNF43Q68DV7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RNF43Q68DV7 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 AC046158.3-201ENST00000624947 2558 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 BX276092.7-203ENST00000637198 1536 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 SPDYE21P-201ENST00000413323 827 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 AC098831.1-202ENST00000438821 336 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 PRYP5-201ENST00000451909 266 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.1■□□□□ 0.49
RNF43Q68DV7 NKAPP1-205ENST00000585790 367 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 AC140113.2-201ENST00000604370 208 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 AC055717.3-201ENST00000622967 595 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 FAM215A-202ENST00000632077 792 ntBASIC18.1■□□□□ 0.49
RNF43Q68DV7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RNF43Q68DV7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
RNF43Q68DV7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RNF43Q68DV7 RPS2P28-201ENST00000314255 741 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms